Faculty

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Jonathan Katz, PhD
Assistant Professor of Research Medicine
Medicine
CSC 240 Health Sciences Campus Los Angeles
+1 323 205 5289

Overview

Dr. Katz earned his B.S. in Microbiology & Molecular Genetics and Cognitive Science. He then went on to earn his PhD in Biochemistry and Molecular Biology from University of California, Los Angeles.

Dr. Katz's research interests include mass spectrometry, proteomics and elucidation of novel clinical prognostic markers.

Publications

Virtualization of Legacy Instrumentation Control Computers for Improved Reliability, Operational Life, and Management. Methods Mol Biol. 2017; 1550:309-324. View in: PubMed

Krüppel-like factors in cancer. Nat Rev Cancer. 2013 Oct; 13(10):701-13. View in: PubMed

A physical sciences network characterization of non-tumorigenic and metastatic cells. Sci Rep. 2013; 3:1449. View in: PubMed

A cross-platform toolkit for mass spectrometry and proteomics. Nat Biotechnol. 2012 Oct 10; 30(10):918-20. View in: PubMed

Quantitative Proteomic Profiling Identifies Protein Correlates to EGFR Kinase Inhibition. Mol Cancer Ther. 2012 May; 11(5):1071-81. View in: PubMed

Installation and Use of LabKey Server for Proteomics. Curr Protoc Bioinformatics. 2011 Dec; Chapter 13:Unit13. 5. View in: PubMed

A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas. Mol Cell Proteomics. 2011 Sep; 10(9):M110. 006353. View in: PubMed

Model-based discovery of circulating biomarkers. Methods Mol Biol. 2011; 728:87-107. View in: PubMed

Peptide identification from mixture tandem mass spectra. Mol Cell Proteomics. 2010 Jul; 9(7):1476-85. View in: PubMed

Precursor-ion mass re-estimation improves peptide identification on hybrid instruments. J Proteome Res. 2008 Sep; 7(9):4031-9. View in: PubMed

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools. J Proteome Res. 2008 Jan; 7(1):96-103. View in: PubMed

Beta-2-microglobulin is an androgen-regulated secreted protein elevated in serum of patients with advanced prostate cancer. Clin Cancer Res. 2007 Apr 1; 13(7):1979-86. View in: PubMed

c-Fos facilitates the acquisition and extinction of cocaine-induced persistent changes. J Neurosci. 2006 Dec 20; 26(51):13287-96. View in: PubMed

Clinical proteomics: the promises and challenges of mass spectrometry-based biomarker discovery. Clin Adv Hematol Oncol. 2006 Jul; 4(7):541-9. View in: PubMed

Yeast Hsl7 (histone synthetic lethal 7) catalyses the in vitro formation of omega-N(G)-monomethylarginine in calf thymus histone H2A. Biochem J. 2006 May 1; 395(3):563-70. View in: PubMed

A perspective on protein profiling of blood. BJU Int. 2005 Sep; 96(4):477-82. View in: PubMed

Prescription drug use and risk of acute myeloid leukemia by French-American-British subtype: results from a Los Angeles County case-control study. Int J Cancer. 2005 Apr 20; 114(4):634-8. View in: PubMed

Subtle modification of isotope ratio proteomics; an integrated strategy for expression proteomics. Phytochemistry. 2004 Jun; 65(11):1507-15. View in: PubMed

3-Isopropylmalate is the major endogenous substrate of the Saccharomyces cerevisiae trans-aconitate methyltransferase. Biochemistry. 2004 May 25; 43(20):5976-86. View in: PubMed

A new technique (COMSPARI) to facilitate the identification of minor compounds in complex mixtures by GC/MS and LC/MS: tools for the visualization of matched datasets. J Am Soc Mass Spectrom. 2004 Apr; 15(4):580-4. View in: PubMed

Automated identification of putative methyltransferases from genomic open reading frames. Mol Cell Proteomics. 2003 Aug; 2(8):525-40. View in: PubMed

Structure and function of an archaeal homolog of survival protein E (SurEalpha): an acid phosphatase with purine nucleotide specificity. J Mol Biol. 2003 Mar 7; 326(5):1559-75. View in: PubMed

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