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Matthew Salomon

Assistant Professor of Clinical Translational Genomics

Director, Masters in Translational Biomedical Informatics

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Phone +1 323 442 8839
Email msalomon@usc.edu
CTSI Profile

Publications

  • Construction and validation of a gene expression classifier to predict immunotherapy response in primary triple-negative breast cancer Commun Med (Lond). 2023 Jul 10; 3(1):93. . View in PubMed
  • Age-related next-generation sequencing mutational analysis in 1196 melanomas J Surg Oncol. 2023 Jun; 127(7):1187-1195. . View in PubMed
  • Chronic HCV infection promotes cytotoxicity in antigen-specific CD8+ T cells regardless of virus specificity Front Virol. 2023; 3. . View in PubMed
  • Emergence of highly profibrotic and proinflammatory Lrat+Fbln2+ HSC subpopulation in alcoholic hepatitis Hepatology. 2023 07 01; 78(1):212-224. . View in PubMed
  • Neutrophilic inflammation promotes SARS-CoV-2 infectivity and augments the inflammatory responses in airway epithelial cells Front Immunol. 2023; 14:1112870. . View in PubMed
  • Chromatin insulation orchestrates matrix metalloproteinase gene cluster expression reprogramming in aggressive breast cancer tumors Mol Cancer. 2023 11 28; 22(1):190. . View in PubMed
  • Etiology of end-stage liver cirrhosis impacts hepatic natural killer cell heterogenicity Front Immunol. 2023; 14:1137034. . View in PubMed
  • Neutrophilic inflammation promotes SARS-CoV-2 infectivity and augments the inflammatory responses in airway epithelial cells bioRxiv. 2022 Jun 06. . View in PubMed
  • Correction to: When left does not seem right: epigenetic and bioelectric differences between left and right-sided breast cancer Mol Med. 2022 Feb 28; 28(1):25. . View in PubMed
  • When left does not seem right: epigenetic and bioelectric differences between left- and right-sided breast cancer Mol Med. 2022 02 05; 28(1):15. . View in PubMed
  • Hepatic damage caused by long-term high cholesterol intake induces a dysfunctional restorative macrophage population in experimental NASH Front Immunol. 2022; 13:968366. . View in PubMed
  • Single-cell transcriptomic analyses of T cells in chronic HCV-infected patients dominated by DAA-induced interferon signaling changes PLoS Pathog. 2021 08; 17(8):e1009799. . View in PubMed
  • Vitamin D deficiency exacerbates UV/endorphin and opioid addiction Sci Adv. 2021 06; 7(24). . View in PubMed
  • Cholesterol-Induced M4-Like Macrophages Recruit Neutrophils and Induce NETosis Front Immunol. 2021; 12:671073. . View in PubMed
  • Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer Front Oncol. 2021; 11:681476. . View in PubMed
  • Cancers (Basel). 2020 Apr 27; 12(5). . View in PubMed
  • Prospective Molecular Profiling of Circulating Tumor Cells from Patients with Melanoma Receiving Combinatorial Immunotherapy Clin Chem. 2020 01 01; 66(1):169-177. . View in PubMed
  • Clinicopathological Features of Triple-Negative Breast Cancer Epigenetic Subtypes Ann Surg Oncol. 2019 Oct; 26(10):3344-3353. . View in PubMed
  • Clinical Implications of Transcriptomic Changes After Neoadjuvant Chemotherapy in Patients with Triple-Negative Breast Cancer Ann Surg Oncol. 2019 Oct; 26(10):3185-3193. . View in PubMed
  • Epigenetic Classifiers for Precision Diagnosis of Brain Tumors Epigenet Insights. 2019; 12:2516865719840284. . View in PubMed
  • Evolution of the Mutational Process under Relaxed Selection in Caenorhabditis elegans Mol Biol Evol. 2019 02 01; 36(2):239-251. . View in PubMed
  • The metastatic microenvironment: Melanoma-microglia cross-talk promotes the malignant phenotype of melanoma cells Int J Cancer. 2019 02 15; 144(4):802-817. . View in PubMed
  • Early Loss of Histone H2B Monoubiquitylation Alters Chromatin Accessibility and Activates Key Immune Pathways That Facilitate Progression of Ovarian Cancer Cancer Res. 2019 02 15; 79(4):760-772. . View in PubMed
  • Predominance of triple wild-type and IGF2R mutations in mucosal melanomas BMC Cancer. 2018 Oct 30; 18(1):1054. . View in PubMed
  • Epigenomic and Transcriptomic Characterization of Secondary Breast Cancers Ann Surg Oncol. 2018 Oct; 25(10):3082-3087. . View in PubMed
  • Distinct histone modifications denote early stress-induced drug tolerance in cancer Oncotarget. 2018 Feb 02; 9(9):8206-8222. . View in PubMed
  • The Epigenomic Landscape of Pituitary Adenomas Reveals Specific Alterations and Differentiates Among Acromegaly, Cushing’s Disease and Endocrine-Inactive Subtypes Clin Cancer Res. 2018 09 01; 24(17):4126-4136. . View in PubMed
  • Brain metastasis DNA methylomes, a novel resource for the identification of biological and clinical features Sci Data. 2018 11 06; 5:180245. . View in PubMed
  • Humanin Prevents Age-Related Cognitive Decline in Mice and is Associated with Improved Cognitive Age in Humans Sci Rep. 2018 09 21; 8(1):14212. . View in PubMed
  • Multiplex Gene Profiling of Cell-Free DNA in Patients With Metastatic Melanoma for Monitoring Disease JCO Precis Oncol. 2018; 2. . View in PubMed
  • Epigenetic profiling for the molecular classification of metastatic brain tumors Nat Commun. 2018 11 06; 9(1):4627. . View in PubMed
  • Clin Cancer Res. 2017 Aug 15; 23(16):4831-4842. . View in PubMed
  • Genome-wide chromatin accessibility, DNA methylation and gene expression analysis of histone deacetylase inhibition in triple-negative breast cancer Genom Data. 2017 Jun; 12:14-16. . View in PubMed
  • The Mitochondrial Lon Protease Is Required for Age-Specific and Sex-Specific Adaptation to Oxidative Stress Curr Biol. 2017 Jan 09; 27(1):1-15. . View in PubMed
  • Early mutation bursts in colorectal tumors PLoS One. 2017; 12(3):e0172516. . View in PubMed
  • GWASeq: targeted re-sequencing follow up to GWAS BMC Genomics. 2016 Mar 03; 17:176. . View in PubMed
  • Many private mutations originate from the first few divisions of a human colorectal adenoma J Pathol. 2015 Nov; 237(3):355-62. . View in PubMed
  • The Wright stuff: reimagining path analysis reveals novel components of the sex determination hierarchy in Drosophila melanogaster BMC Syst Biol. 2015 Sep 04; 9:53. . View in PubMed
  • Population genomic analysis uncovers African and European admixture in Drosophila melanogaster populations from the south-eastern United States and Caribbean Islands Mol Ecol. 2015 Apr; 24(7):1499-509. . View in PubMed
  • Natural variation of gene models in Drosophila melanogaster BMC Genomics. 2015 Mar 17; 16:198. . View in PubMed
  • A Big Bang model of human colorectal tumor growth Nat Genet. 2015 Mar; 47(3):209-16. . View in PubMed
  • The progesterone antagonist mifepristone/RU486 blocks the negative effect on life span caused by mating in female Drosophila Aging (Albany NY). 2015 Jan; 7(1):53-69. . View in PubMed
  • Temperature, stress and spontaneous mutation in Caenorhabditis briggsae and Caenorhabditis elegans Biol Lett. 2013 Feb 23; 9(1):20120334. . View in PubMed
  • G3 (Bethesda). 2012 Dec; 2(12):1497-503. . View in PubMed
  • Rapid decline in fitness of mutation accumulation lines of gonochoristic (outcrossing) Caenorhabditis nematodes Evolution. 2010 Nov; 64(11):3242-53. . View in PubMed
  • Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2009-31 January 2010 Mol Ecol Resour. 2010 May; 10(3):576-9. . View in PubMed
  • Genetic (Co)variation for life span in rhabditid nematodes: role of mutation, selection, and history J Gerontol A Biol Sci Med Sci. 2009 Nov; 64(11):1134-45. . View in PubMed
  • Comparing mutational and standing genetic variability for fitness and size in Caenorhabditis briggsae and Celegans. Genetics. 2009 Oct; 183(2):685-921SI-19SI. . View in PubMed
  • Spontaneous mutational and standing genetic (co)variation at dinucleotide microsatellites in Caenorhabditis briggsae and Caenorhabditis elegans Mol Biol Evol. 2009 Mar; 26(3):659-69. . View in PubMed

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