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Yonggang Shi, PhD

Associate Professor of Neurology

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Phone +1 323 442 7246
Email yonggans@usc.edu
CTSI Profile

Publications

  • Diffusion MRI harmonization via personalized template mapping Hum Brain Mapp. 2024 Apr; 45(5):e26661. . View in PubMed
  • Vessel density mapping of small cerebral vessels on 3D high resolution black blood MRI Neuroimage. 2024 Feb 01; 286:120504. . View in PubMed
  • Retinotopic degeneration of the retina and optic tracts in autosomal dominant Alzheimer’s disease Alzheimers Dement. 2023 Nov; 19(11):5103-5113. . View in PubMed
  • Flow-based Geometric Interpolation of Fiber Orientation Distribution Functions Med Image Comput Comput Assist Interv. 2023 Oct; 14227:46-55. . View in PubMed
  • Shape-Aware 3D Small Vessel Segmentation with Local Contrast Guided Attention Med Image Comput Comput Assist Interv. 2023 Oct; 14223:354-363. . View in PubMed
  • FASSt : Filtering via Symmetric Autoencoder for Spherical Superficial White Matter Tractography Comput Diffus MRI. 2023 Oct; 14328:129-139. . View in PubMed
  • Uncovering Heterogeneity in Alzheimer’s Disease from Graphical Modeling of the Tau Spatiotemporal Topography Med Image Comput Comput Assist Interv. 2023 Oct; 14224:262-271. . View in PubMed
  • Personalized Patch-based Normality Assessment of Brain Atrophy in Alzheimer’s Disease Med Image Comput Comput Assist Interv. 2023 Oct; 14224:55-62. . View in PubMed
  • Automated Mapping of Residual Distortion Severity in Diffusion MRI Comput Diffus MRI. 2023; 14328:58-69. . View in PubMed
  • Retinal ganglion cell endowment is correlated with optic tract fiber cross section, not density Neuroimage. 2022 Oct 15; 260:119495. . View in PubMed
  • Hippocampal asymmetry of regional development and structural covariance in preterm neonates Cereb Cortex. 2022 Sep 19; 32(19):4271-4283. . View in PubMed
  • Personalized dMRI Harmonization on Cortical Surface Med Image Comput Comput Assist Interv. 2022 Sep; 13436:717-725. . View in PubMed
  • Locus coeruleus integrity is related to tau burden and memory loss in autosomal-dominant Alzheimer’s disease Neurobiol Aging. 2022 04; 112:39-54. . View in PubMed
  • Sight restoration reverses blindness-induced cross-modal functional connectivity changes between the visual and somatosensory cortex at rest Front Neurosci. 2022; 16:902866. . View in PubMed
  • Enhanced Association of Tau Pathology and Cognitive Impairment in Mild Cognitive Impairment Subjects with Behavior Symptoms J Alzheimers Dis. 2022; 87(2):557-568. . View in PubMed
  • Exploratory imaging outcomes of a phase 1b/2a clinical trial of allopregnanolone as a regenerative therapeutic for Alzheimer’s disease: Structural effects and functional connectivity outcomes Alzheimers Dement (N Y). 2022; 8(1):e12258. . View in PubMed
  • Age differences in diffusivity in the locus coeruleus and its ascending noradrenergic tract Neuroimage. 2022 05 01; 251:119022. . View in PubMed
  • Mapping Complex Brain Torque Components and Their Genetic Architecture and Phenomic Associations in 24,112 Individuals Biol Psychiatry. 2022 04 15; 91(8):753-768. . View in PubMed
  • Past, present and future role of retinal imaging in neurodegenerative disease Prog Retin Eye Res. 2021 07; 83:100938. . View in PubMed
  • The effect of body mass index on hippocampal morphology and memory performance in late childhood and adolescence Hippocampus. 2021 02; 31(2):189-200. . View in PubMed
  • Retinal Venular Tortuosity Jointly with Retinal Amyloid Burden Correlates with Verbal Memory Loss: A Pilot Study Cells. 2021 10 28; 10(11). . View in PubMed
  • Retrospective motion artifact correction of structural MRI images using deep learning improves the quality of cortical surface reconstructions Neuroimage. 2021 04 15; 230:117756. . View in PubMed
  • The Health & Aging Brain among Latino Elders (HABLE) study methods and participant characteristics Alzheimers Dement (Amst). 2021; 13(1):e12202. . View in PubMed
  • Using Fractional Anisotropy Imaging to Detect Mild Cognitive Impairment and Alzheimer’s Disease among Mexican Americans and Non-Hispanic Whites: A HABLE Study Dement Geriatr Cogn Disord. 2021; 50(3):266-273. . View in PubMed
  • A probabilistic atlas of locus coeruleus pathways to transentorhinal cortex for connectome imaging in Alzheimer’s disease Neuroimage. 2020 12; 223:117301. . View in PubMed
  • Emotional detachment, gait ataxia, and cerebellar dysconnectivity associated with compound heterozygous mutations in the SPG7 gene Neurocase. 2020 10; 26(5):299-304. . View in PubMed
  • Groupwise track filtering via iterative message passing and pruning Neuroimage. 2020 11 01; 221:117147. . View in PubMed
  • Morphometric development of the human fetal cerebellum during the early second trimester Neuroimage. 2020 02 15; 207:116372. . View in PubMed
  • Safety, tolerability, and pharmacokinetics of allopregnanolone as a regenerative therapeutic for Alzheimer’s disease: A single and multiple ascending dose phase 1b/2a clinical trial Alzheimers Dement (N Y). 2020; 6(1):e12107. . View in PubMed
  • Unsupervised Deep Learning for Susceptibility Distortion Correction in Connectome Imaging Med Image Comput Comput Assist Interv. 2020; 12267:302-310. . View in PubMed
  • Topographic Filtering of Tractograms as Vector Field Flows Med Image Comput Comput Assist Interv. 2019; 11766:564-572. . View in PubMed
  • Surface-based Tracking of U-fibers in the Superficial White Matter Med Image Comput Comput Assist Interv. 2019; 11766:538-546. . View in PubMed
  • Hippocampal Shape Maturation in Childhood and Adolescence Cereb Cortex. 2019 08 14; 29(9):3651-3665. . View in PubMed
  • Limits to anatomical accuracy of diffusion tractography using modern approaches Neuroimage. 2019 01 15; 185:1-11. . View in PubMed
  • Characterization of lenticulostriate arteries with high resolution black-blood T1-weighted turbo spin echo with variable flip angles at 3 and 7? Tesla. Neuroimage. 2019 10 01; 199:184-193.. View in PubMed
  • FOD-based registration for susceptibility distortion correction in brainstem connectome imaging Neuroimage. 2019 11 15; 202:116164. . View in PubMed
  • 3D Surface-Based Geometric and Topological Quantification of Retinal Microvasculature in OCT-Angiography via Reeb Analysis Med Image Comput Comput Assist Interv. 2019; 11764:57-65. . View in PubMed
  • Relationship between retinal vessel tortuosity and oxygenation in sickle cell retinopathy Int J Retina Vitreous. 2019; 5:47. . View in PubMed
  • Patch-based Mapping of Transentorhinal Cortex with a Distributed Atlas Med Image Comput Comput Assist Interv. 2018 Sep; 11072:689-697. . View in PubMed
  • When tractography meets tracer injections: a systematic study of trends and variation sources of diffusion-based connectivity Brain Struct Funct. 2018 Jul; 223(6):2841-2858. . View in PubMed
  • Modeling topographic regularity in structural brain connectivity with application to tractogram filtering Neuroimage. 2018 12; 183:87-98. . View in PubMed
  • Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space Med Image Anal. 2018 05; 46:189-201. . View in PubMed
  • Thalamic atrophy in multiple sclerosis: A magnetic resonance imaging marker of neurodegeneration throughout disease Ann Neurol. 2018 02; 83(2):223-234. . View in PubMed
  • Tracking and validation techniques for topographically organized tractography Neuroimage. 2018 11 01; 181:64-84. . View in PubMed
  • A probabilistic atlas of human brainstem pathways based on connectome imaging data Neuroimage. 2018 04 01; 169:227-239. . View in PubMed
  • GIFE: Efficient and Robust Group-wise Isometric Fiber Embedding Connect Neuroimaging (2018). 2018 Sep; 11083:20-28. . View in PubMed
  • FOD-based Registration for Susceptibility Distortion Correction in Connectome Imaging Connect Neuroimaging (2018). 2018; 11083:11-19. . View in PubMed
  • Multivariate Classification of Major Depressive Disorder Using the Effective Connectivity and Functional Connectivity Front Neurosci. 2018; 12:38. . View in PubMed
  • Topological false discovery rates for brain mapping based on signal height Neuroimage. 2018 02 15; 167:478-487. . View in PubMed
  • Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space Med Image Comput Comput Assist Interv. 2017 Sep; 10433:21-30. . View in PubMed
  • FOD Restoration for Enhanced Mapping of White Matter Lesion Connectivity Med Image Comput Comput Assist Interv. 2017 Sep; 10433:584-592. . View in PubMed
  • Kernel-Regularized ICA for Computing Functional Topography from Resting-state fMRI Med Image Comput Comput Assist Interv. 2017 Sep; 10433:373-381. . View in PubMed
  • Topographic Regularity for Tract Filtering in Brain Connectivity Inf Process Med Imaging. 2017 Jun; 10265:263-274. . View in PubMed
  • Optical coherence tomography angiography: A comprehensive review of current methods and clinical applications Prog Retin Eye Res. 2017 09; 60:66-100. . View in PubMed
  • Preface Comput Med Imaging Graph. 2017 Jan; 55:1. . View in PubMed
  • Riemannian Metric Optimization for Connectivity-driven Surface Mapping Med Image Comput Comput Assist Interv. 2016 Oct; 9900:228-236. . View in PubMed
  • Probabilistic Tractography for Topographically Organized Connectomes Med Image Comput Comput Assist Interv. 2016 Oct; 9900:201-209. . View in PubMed
  • Mapping Brain Anatomical Connectivity Using Diffusion Magnetic Resonance Imaging: Structural connectivity of the human brain IEEE Signal Process Mag. 2016 May; 33(3):36-51. . View in PubMed
  • Automated retinofugal visual pathway reconstruction with multi-shell HARDI and FOD-based analysis Neuroimage. 2016 Jan 15; 125:767-779. . View in PubMed
  • Brainhack: a collaborative workshop for the open neuroscience community Gigascience. 2016; 5:16. . View in PubMed
  • Phenotypic and Genetic Correlations Between the Lobar Segments of the Inferior Fronto-occipital Fasciculus and Attention Sci Rep. 2016 09 06; 6:33015. . View in PubMed
  • Feasibility of Structural and Functional MRI Acquisition with Unpowered Implants in Argus II Retinal Prosthesis Patients: A Case Study Transl Vis Sci Technol. 2015 Dec; 4(6):6. . View in PubMed
  • Track Filtering via Iterative Correction of TDI Topology Med Image Comput Comput Assist Interv. 2015 Oct; 9349:20-27. . View in PubMed
  • Development of the human fetal hippocampal formation during early second trimester Neuroimage. 2015 Oct 01; 119:33-43. . View in PubMed
  • AUTOMATED MULTI-ATLAS LABELING OF THE FORNIX AND ITS INTEGRITY IN ALZHEIMER’S DISEASE Proc IEEE Int Symp Biomed Imaging. 2015 Apr; 2015:140-143. . View in PubMed
  • Automatic clustering of white matter fibers in brain diffusion MRI with an application to genetics Neuroimage. 2014 Oct 15; 100:75-90. . View in PubMed
  • Regional neuroplastic brain changes in patients with chronic inflammatory and non-inflammatory visceral pain PLoS One. 2014; 9(1):e84564. . View in PubMed
  • Technological advances in neuroimaging: neurosurgical applications for the future World Neurosurg. 2014; 82(1-2):32-4. . View in PubMed

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