Scott E Fraser, PhD

Provost Professor of Biological Sciences & Biomedical Engineering

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Overview

Fraser Lab Website

Professor Scott E. Fraser has a long-standing commitment to quantitative biology, applying the tools of chemistry, engineering and physics to problems in biology and medicine. His personal research centers on imaging and molecular analyses of intact biological systems, with an emphasis on early development, organogenesis, and medical diagnostics. After training in physics (BS, Harvey Mudd College, 1976) and biophysics (PhD, Johns Hopkins University, 1979), he joined the faculty at UC Irvine, and rose through the ranks to become Chair of the Department of Physiology and Biophysics. In 1990 he moved to Caltech to serve as the Anna L. Rosen Professor of Biology, and the Director of the Biological Imaging Center. He is deeply committed to interdisciplinary training and translational research, having helped found the Caltech Brain Imaging Center and the Kavli Institute of Nanoscience, as well as serving as the Director of the Rosen Center for Biological Engineering. In Fall 2012, he moved to USC to take a Provost Professorship in the Dornsife College of Letters, Arts and Sciences, the Children’s Hospital Los Angeles, Keck School of Medicine and the Viterbi School of Engineering. He remains active in interdisciplinary research and serves as the Director of Science Initiatives for the USC campuses.

Research Funding

  • In vivo Imaging of the Human Retina at the Molecular Level
    NIH · R01EY032994 · Mar 1, 2024 – Feb 29, 2028 · Role: Co-Principal Investigator
  • Early tumorigenesis in vivo imaging, scRNA-seq to functional assays
    NIH · R21CA267849 · Dec 13, 2021 – Nov 30, 2023 · Role: Co-Principal Investigator
  • Circuits underlying threat and safety
    NIH · U01NS122082 · Apr 15, 2021 – Mar 31, 2024 · Role: Co-Principal Investigator
  • In vivo imaging of tumor heterogeneity generation from endogenous single cells
    NIH · R21CA209012 · Jul 1, 2016 – Jun 30, 2019 · Role: Principal Investigator
  • Dynamic mapping of the complete synaptome using recombinant probes
    NIH · R01MH107238 · Sep 25, 2014 – Jul 31, 2020 · Role: Co-Principal Investigator
  • Phase Contrast OCT for Non-Invasive Imaging of Retinovascular Disease
    NIH · R42EY021054 · Sep 30, 2010 – May 31, 2016 · Role: Principal Investigator
  • Characterization of Exudative Macular Degeneration and Diabetic Retinopathy Using
    NIH · R41EY021054 · Sep 30, 2010 – Jun 29, 2012 · Role: Principal Investigator
  • Functional analysis of neural crest & palate: Imaging craniofacial development
    NIH · U01DE020063 · Sep 21, 2009 – Apr 30, 2014 · Role: Principal Investigator
  • Center for in Toto Genomic Analysis of Vertebrate Development
    NIH · P50HG004071 · Aug 15, 2006 – Jul 31, 2012 · Role: Principal Investigator
  • Hemodynamic Forces in Vascular Remodeling
    NIH · R01HL078694 · Sep 22, 2004 – Aug 31, 2008 · Role: Principal Investigator
  • Intravital imaging of neuronal development
    NIH · R01HD043897 · Jan 15, 2003 – Jan 14, 2007 · Role: Principal Investigator
  • Santa Cruz Meeting on Developmental Biology
    NIH · R13HD042812 · Jun 5, 2002 – May 31, 2003 · Role: Principal Investigator
  • OPTIC NERVE DEMYELINATION STUDY USING MRI
    NIH · R01EY011933 · Sep 30, 1999 – Sep 29, 2003 · Role: Principal Investigator
  • GORDON CONFERENCE ON DEVELOPMENTAL BIOLOGY
    NIH · R13HD033376 · Jul 27, 1995 – Jun 30, 1996 · Role: Principal Investigator
  • CELLULAR BASES OF COCAINE-INDUCED BRAIN ABNORMALITIES
    NIH · R55DA008689 · Sep 30, 1993 – Aug 31, 1995 · Role: Principal Investigator
  • VITAL DYE ANALYSIS OF HINDBRAIN DEVELOPMENT
    NIH · R01HD029304 · Sep 1, 1991 – Aug 31, 1996 · Role: Principal Investigator
  • DYNAMIC ASPECTS OF NEURONAL PATTERNING
    NIH · R01EY008363 · Dec 1, 1989 – Nov 30, 1992 · Role: Principal Investigator
  • FUNCTIONAL RECONSTRUCTION OF NEURONAL SYSTEMS
    NIH · R01NS025210 · Sep 1, 1987 – Aug 31, 1990 · Role: Principal Investigator

Publications

  • SERCA directs cell migration and branching across species and germ layers. Biol Open. 2017 Oct 15; 6(10):1458-1471.. View in PubMed
  • Using a linked database for epidemiology across the primary and secondary care divide: acute kidney injury. BMC Med Inform Decis Mak. 2017 Jul 11; 17(1):106.. View in PubMed
  • Structural and Functional Characterization of Human Stem-Cell-Derived Retinal Organoids by Live Imaging. Invest Ophthalmol Vis Sci. 2017 07 01; 58(9):3311-3318.. View in PubMed
  • 3D in vivo imaging with extended-focus optical coherence microscopy. J Biophotonics. 2017 Nov; 10(11):1411-1420.. View in PubMed
  • Biotagging of Specific Cell Populations in Zebrafish Reveals Gene Regulatory Logic Encoded in the Nuclear Transcriptome. Cell Rep. 2017 04 11; 19(2):425-440.. View in PubMed
  • Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging. Nat Methods. 2017 02; 14(2):149-152.. View in PubMed
  • Phase variance optical coherence microscopy for label-free imaging of the developing vasculature in zebrafish embryos. J Biomed Opt. 2016 12 01; 21(12):126022.. View in PubMed
  • Macrophage Epithelial Reprogramming Underlies Mycobacterial Granuloma Formation and Promotes Infection. Immunity. 2016 10 18; 45(4):861-876.. View in PubMed
  • Mapping a multiplexed zoo of mRNA expression. Development. 2016 10 01; 143(19):3632-3637.. View in PubMed
  • Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects. PLoS Biol. 2016 09; 14(9):e2000197.. View in PubMed