Zhongwei Li, PhD

Associate Professor of Medicine and Stem Cell Biology and Regenerative Medicine

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Overview

Trained as a stem cell biologist, Dr. Zhongwei Li has been using mouse models, human pluripotent stem cells, kidney progenitor cells, and kidney organoids as model systems to study stem cell biology, organ regeneration, and disease modeling for more than 17 years. As a graduate student in Dr. Ye-Guang Chen’s lab at Tsinghua University (2007-2012), he studied the molecular mechanisms of how different signaling pathways coordinate to determine pluripotent stem cell fates. Dr. Li identified a novel signaling cascade, BMP/Smad/DUSP9/ERK, essential in the crosstalk and intracellular integration of extrinsic signals (LIF and BMP) to regulate pluripotent stem cell fates (Li et al., Cell Stem Cell, 2012). As a postdoctoral fellow in Dr. Juan Carlos Izpisua Belmonte’s lab at the Salk Institute for Biological Studies (2012-2017), he focused on kidney regeneration and developed a three-dimensional culture system which enabled, for the first time, the long-term expansion of primary nephron progenitor cells, which can further generate nephrons, the functional units of the kidney, in a nephron organoid model in vitro and in a chimeric mouse model in vivo (Li et al., Cell Stem Cell, 2016). As an assistant professor at USC (2017-present), his long-term research goal is to engineer a synthetic kidney from stem cells as an alternative off-the-shelf source for kidney transplantation (funded by NIH Director’s New Innovator Award). Dr. Li’s short-term research goal is to develop next-generation mature and functional kidney organoid models for kidney disease modeling and drug discovery (Zeng et al., Nature Communications, 2021; Huang et al., Cell Stem Cell, 2024). His research combines state-of-the-art stem cell technologies, genome editing tools, and bioengineering approaches to achieve these goals. Dr. Li’s lab integrates research strategies from a broad range of disciplines including molecular biology, cell biology, developmental biology, genetics, genomics, bioinformatics, and bioengineering.

Awards

  • NIH: NIH Director’s New Innovator Award, 2022
  • University of Southern California: “Heros Among Us” Medal, 2022
  • School of Life Sciences of Tsinghua University: Representative Alumni Award, 2021
  • Keck School of Medicine of USC: Dean’s Pilot Award, 2019
  • Wright Foundation: Wright Foundation Pilot Award, 2018
  • Institute of Scientific and Technical Information of China (ISTIC): Top 100 Influential Research Articles in China (2012), 2013
  • Johnson & Johnson: “Johnson & Johnson Asia Outstanding Thesis Award in Bio-tech”, 1st Prize, 2012
  • Ray Wu Memorial Fund: Ray Wu Prize, 2012
  • City of Beijing: Outstanding Ph.D. Graduate Award, 2012
  • Tsinghua University: Outstanding Ph.D. Graduate Award, 2012
  • Tsinghua University: Outstanding Ph.D. Thesis Award, 2012
  • Sichuan University: Outstanding Undergraduate Award, 2007
  • Sichuan University: Outstanding Undergraduate Thesis Award, 2007

Education and Training

  • Salk Institute for Biological Studies, La Jolla, California — Postdoc — 08/2017 — Stem Cell and Regenerative Medicine
  • Tsinghua University, Beijing, China — PhD — 07/2012 — Molecular Cell Biology
  • Sichuan University, Chengdu, China — BS — 07/2007 — Biotechnology

Publications

  • Spatially patterned kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling. Cell Stem Cell. 2025 Oct 02; 32(10):1614-1633.e13.. View in PubMed
  • Expansion of human pluripotent stem cell-induced nephron progenitor cells (iNPCs) and the generation of nephron organoids from iNPCs. Nat Protoc. 2026 03; 21(3):1167-1191.. View in PubMed
  • Dmrt2 and Hmx2 direct intercalated cell diversity in the mammalian kidney through antagonistic and supporting regulatory processes. Proc Natl Acad Sci U S A. 2025 May 20; 122(20):e2418471122.. View in PubMed
  • Human iPSC-derived nephron progenitor cells treat acute kidney injury and chronic kidney disease in mouse models. Sci Transl Med. 2025 04 02; 17(792):eadt5553.. View in PubMed
  • Long-term expandable mouse and human-induced nephron progenitor cells enable kidney organoid maturation and modeling of plasticity and disease. Cell Stem Cell. 2024 06 06; 31(6):921-939.e17.. View in PubMed
  • Building a kidney tree: Functional collecting duct from human pluripotent stem cells. Dev Cell. 2022 10 10; 57(19):2251-2253.. View in PubMed
  • Approaches to kidney replacement therapies-opportunities and challenges. Front Cell Dev Biol. 2022; 10:953408.. View in PubMed
  • Wiskott-Aldrich syndrome protein forms nuclear condensates and regulates alternative splicing. Nat Commun. 2022 06 25; 13(1):3646.. View in PubMed
  • Generation of patterned kidney organoids that recapitulate the adult kidney collecting duct system from expandable ureteric bud progenitors. Nat Commun. 2021 06 15; 12(1):3641.. View in PubMed
  • A Modular Differentiation System Maps Multiple Human Kidney Lineages from Pluripotent Stem Cells. Cell Rep. 2020 04 07; 31(1):107476.. View in PubMed