Scott E Fraser, PhD

Provost Professor of Biological Sciences & Biomedical Engineering

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Overview

Fraser Lab Website

Professor Scott E. Fraser has a long-standing commitment to quantitative biology, applying the tools of chemistry, engineering and physics to problems in biology and medicine. His personal research centers on imaging and molecular analyses of intact biological systems, with an emphasis on early development, organogenesis, and medical diagnostics. After training in physics (BS, Harvey Mudd College, 1976) and biophysics (PhD, Johns Hopkins University, 1979), he joined the faculty at UC Irvine, and rose through the ranks to become Chair of the Department of Physiology and Biophysics. In 1990 he moved to Caltech to serve as the Anna L. Rosen Professor of Biology, and the Director of the Biological Imaging Center. He is deeply committed to interdisciplinary training and translational research, having helped found the Caltech Brain Imaging Center and the Kavli Institute of Nanoscience, as well as serving as the Director of the Rosen Center for Biological Engineering. In Fall 2012, he moved to USC to take a Provost Professorship in the Dornsife College of Letters, Arts and Sciences, the Children’s Hospital Los Angeles, Keck School of Medicine and the Viterbi School of Engineering. He remains active in interdisciplinary research and serves as the Director of Science Initiatives for the USC campuses.

Research Funding

  • In vivo Imaging of the Human Retina at the Molecular Level
    NIH · R01EY032994 · Mar 1, 2024 – Feb 29, 2028 · Role: Co-Principal Investigator
  • Early tumorigenesis in vivo imaging, scRNA-seq to functional assays
    NIH · R21CA267849 · Dec 13, 2021 – Nov 30, 2023 · Role: Co-Principal Investigator
  • Circuits underlying threat and safety
    NIH · U01NS122082 · Apr 15, 2021 – Mar 31, 2024 · Role: Co-Principal Investigator
  • In vivo imaging of tumor heterogeneity generation from endogenous single cells
    NIH · R21CA209012 · Jul 1, 2016 – Jun 30, 2019 · Role: Principal Investigator
  • Dynamic mapping of the complete synaptome using recombinant probes
    NIH · R01MH107238 · Sep 25, 2014 – Jul 31, 2020 · Role: Co-Principal Investigator
  • Phase Contrast OCT for Non-Invasive Imaging of Retinovascular Disease
    NIH · R42EY021054 · Sep 30, 2010 – May 31, 2016 · Role: Principal Investigator
  • Characterization of Exudative Macular Degeneration and Diabetic Retinopathy Using
    NIH · R41EY021054 · Sep 30, 2010 – Jun 29, 2012 · Role: Principal Investigator
  • Functional analysis of neural crest & palate: Imaging craniofacial development
    NIH · U01DE020063 · Sep 21, 2009 – Apr 30, 2014 · Role: Principal Investigator
  • Center for in Toto Genomic Analysis of Vertebrate Development
    NIH · P50HG004071 · Aug 15, 2006 – Jul 31, 2012 · Role: Principal Investigator
  • Hemodynamic Forces in Vascular Remodeling
    NIH · R01HL078694 · Sep 22, 2004 – Aug 31, 2008 · Role: Principal Investigator
  • Intravital imaging of neuronal development
    NIH · R01HD043897 · Jan 15, 2003 – Jan 14, 2007 · Role: Principal Investigator
  • Santa Cruz Meeting on Developmental Biology
    NIH · R13HD042812 · Jun 5, 2002 – May 31, 2003 · Role: Principal Investigator
  • OPTIC NERVE DEMYELINATION STUDY USING MRI
    NIH · R01EY011933 · Sep 30, 1999 – Sep 29, 2003 · Role: Principal Investigator
  • GORDON CONFERENCE ON DEVELOPMENTAL BIOLOGY
    NIH · R13HD033376 · Jul 27, 1995 – Jun 30, 1996 · Role: Principal Investigator
  • CELLULAR BASES OF COCAINE-INDUCED BRAIN ABNORMALITIES
    NIH · R55DA008689 · Sep 30, 1993 – Aug 31, 1995 · Role: Principal Investigator
  • VITAL DYE ANALYSIS OF HINDBRAIN DEVELOPMENT
    NIH · R01HD029304 · Sep 1, 1991 – Aug 31, 1996 · Role: Principal Investigator
  • DYNAMIC ASPECTS OF NEURONAL PATTERNING
    NIH · R01EY008363 · Dec 1, 1989 – Nov 30, 1992 · Role: Principal Investigator
  • FUNCTIONAL RECONSTRUCTION OF NEURONAL SYSTEMS
    NIH · R01NS025210 · Sep 1, 1987 – Aug 31, 1990 · Role: Principal Investigator

Publications

  • Application of fluorescence lifetime imaging microscopy to monitor glucose metabolism in pancreatic islets in vivo. Biomed Opt Express. 2023 Aug 01; 14(8):4170-4178.. View in PubMed
  • Development of Highly Fluorogenic Styrene Probes for Visualizing RNA in Live Cells. ACS Chem Biol. 2023 07 21; 18(7):1523-1533.. View in PubMed
  • VoDEx: a Python library for time annotation and management of volumetric functional imaging data. ArXiv. 2023 May 11.. View in PubMed
  • A single-shot hyperspectral phasor camera for fast, multi-color fluorescence microscopy. Cell Rep Methods. 2023 04 24; 3(4):100441.. View in PubMed
  • Episodic live imaging of cone photoreceptor maturation in GNAT2-EGFP retinal organoids. bioRxiv. 2023 Mar 01.. View in PubMed
  • HyU: Hybrid Unmixing for longitudinal in vivo imaging of low signal-to-noise fluorescence. Nat Methods. 2023 02; 20(2):248-258.. View in PubMed
  • Cilia function as calcium-mediated mechanosensors that instruct left-right asymmetry. Science. 2023 01 06; 379(6627):71-78.. View in PubMed
  • The kinase occupancy of T cell coreceptors reconsidered. Proc Natl Acad Sci U S A. 2022 12 06; 119(49):e2213538119.. View in PubMed
  • baz1b loss-of-function in zebrafish produces phenotypic alterations consistent with the domestication syndrome. iScience. 2023 Jan 20; 26(1):105704.. View in PubMed
  • Extended depth-of-field light-sheet microscopy improves imaging of large volumes at high numerical aperture. Appl Phys Lett. 2022 Oct 17; 121(16):163701.. View in PubMed